Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score =  457 bits (1175), Expect = e-133
 Identities = 238/376 (63%), Positives = 288/376 (76%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+ VNTNVSA+ AQR+L SA+     S+ERLSSG +INSAKDDAAGLQISNRL  Q RG
Sbjct: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           LG+AVRNANDGIS+ QTAEGAM+ETT +LQRMRDLSLQSANGSNS A+RVA+QEE+ ALN
Sbjct: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           DELNR+AETTSF G KLLNG F   SFQIGA +GEAV L++++MRSD+  MGG +Y AA 
Sbjct: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
             DK W V  GK  L I+  + +  +  I I AKEGDDIEELATYING+TD + ASV+E+
Sbjct: 181 GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE 240

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
           G+LQL+       G  +F G+LA EL +       VD LD+++ GGAQ +V+++D ALKY
Sbjct: 241 GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKY 300

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
           VD HR+ELGA QNRF HAI+NLDN++EN+ AS SRIKD D+AKETT + K QIL Q S+S
Sbjct: 301 VDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSS 360

Query: 361 VLAQAKRQPKFVLFLL 376
           VLAQAK+ P   L LL
Sbjct: 361 VLAQAKQAPNSALALL 376