Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score =  470 bits (1210), Expect = e-137
 Identities = 244/376 (64%), Positives = 291/376 (77%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+ VNTNV+A+ AQR+L  A+     S+ERLSSG +INSAKDDAAGLQISNRL  Q RG
Sbjct: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L +AVRNANDGISI QTAEGAM ETT +LQRMRDLSLQSANGSNS +ERVA+QEE+ ALN
Sbjct: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           DELNRIAETTSF G KLLNG F   SFQIGA +GEAV L+L++MRSD+  MGG SYVAA 
Sbjct: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
             DK W+V  G   +  +  +  G ++ I + AKEGDDIEE+ATYING+TD V ASVNEK
Sbjct: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
           GQLQ++    + +G ++FSG LA  L M     E VD +D++S GGAQ++V+VID+ALKY
Sbjct: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKY 300

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
           VD HR+ELGA QNRF HAISNLDN++EN+ AS SRIKD D+AKETT + K QIL Q S+S
Sbjct: 301 VDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360

Query: 361 VLAQAKRQPKFVLFLL 376
           VLAQAK+ P   L LL
Sbjct: 361 VLAQAKQAPNAALSLL 376