Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

 Score =  433 bits (1113), Expect = e-126
 Identities = 230/376 (61%), Positives = 285/376 (75%), Gaps = 1/376 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+ VNTNVSA+ AQR+LN A++ + +S+ERLSSG +INSA+DDAAGLQISNRL +Q RG
Sbjct: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L +AV+NANDGISI QTAEGAM ETT +LQRMRDL+LQS+NGSNS++ER A+QEE++ALN
Sbjct: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           DELNRIAETTSF G KLLNG F   SFQIGA SGEAV LS+ +MRSD+  MGG SY A  
Sbjct: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQE 180

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
                W+V      L +SY N QGE   + I AK+GDD+EELATYING+T+ V ASV E 
Sbjct: 181 GKAADWRV-GAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGED 239

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
           G+LQL+ + ++ +G ++  G L  E+  +      V ++++S+  G+Q AVS++D ALK 
Sbjct: 240 GKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKA 299

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
           VD  R+ LGA QNRF HAISNLDNV+EN+ AS SRI+D DYA+ETT M K QILQQ STS
Sbjct: 300 VDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTS 359

Query: 361 VLAQAKRQPKFVLFLL 376
           VLAQAK+ P   L LL
Sbjct: 360 VLAQAKQSPSAALSLL 375