Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  135 bits (341), Expect = 1e-36
 Identities = 72/169 (42%), Positives = 112/169 (66%), Gaps = 5/169 (2%)

Query: 5   VNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGIA 64
           + TN SAL A     ++S+ L+ ++ERLS+G RINSAKDDAAGL I++ + +Q++G+   
Sbjct: 4   IGTNSSALRATNASAASSKALSTAMERLSTGKRINSAKDDAAGLAIASSMTSQIKGMTQG 63

Query: 65  VRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELN 124
           +RNANDGIS+ QTAEGA+ E T +LQRMR+L++Q+ N +N    +  ++ E+  L  ++ 
Sbjct: 64  IRNANDGISLAQTAEGALGEVTNMLQRMRELTVQAGNDTNDDTAKGNIKSEIDQLATQIG 123

Query: 125 RIAETTSFAGRKLLNGQFMKAS-----FQIGASSGEAVQLSLRNMRSDS 168
           ++   TSF G KL +G    AS      Q GA+S +A+++ L N+  D+
Sbjct: 124 KVLSDTSFNGIKLFDGSAGPASDGKINIQAGANSSDAIEIDLGNVEDDT 172



 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 34/296 (11%)

Query: 102 GSNSAAERVALQEEMAALNDELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSL 161
           G+NS+A R       AA +  L+   E  S  G+++ + +   A   I +S    ++   
Sbjct: 5   GTNSSALRAT--NASAASSKALSTAMERLS-TGKRINSAKDDAAGLAIASSMTSQIKGMT 61

Query: 162 RNMRSDSLEMGGFSYVAAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEE 221
           + +R+ +  +        AL +    VT   Q++    V A  +  +   +     +I++
Sbjct: 62  QGIRNANDGISLAQTAEGALGE----VTNMLQRMRELTVQAGNDTNDDTAKGNIKSEIDQ 117

Query: 222 LATYINGKTDKVSASVNEKGQLQLY--IAGKETSGTLSFSGSL--ANELQMNLLGYEAVD 277
           LAT I     KV +  +  G ++L+   AG  + G ++       ++ ++++L   E  D
Sbjct: 118 LATQIG----KVLSDTSFNG-IKLFDGSAGPASDGKINIQAGANSSDAIEIDLGNVE--D 170

Query: 278 NLDISS---AGGAQRAVSVI-------------DTALKYVDGHRSELGAMQNRFQHAISN 321
           + D+++   AG    A+ V              D+ALK +D  R+ LGA+QNR +  ++ 
Sbjct: 171 DTDVAAVVTAGATTTALDVTAGTFDVGAALDLYDSALKAIDTSRANLGAVQNRLESTVNT 230

Query: 322 LDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           L     NL  + SRI+DAD++ ETT + K QIL Q ST++LAQA +  + V+ L++
Sbjct: 231 LTANVTNLTDAKSRIEDADFSTETTALAKAQILSQASTAMLAQANQSQQNVMKLIQ 286