Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

 Score =  198 bits (504), Expect = 3e-55
 Identities = 103/191 (53%), Positives = 146/191 (76%), Gaps = 3/191 (1%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+TVNTN++++  Q++LN +S+ L  ++ RLSSG +INSAKDDAAGLQISNRL TQ++G
Sbjct: 1   MALTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L +AV+NANDGISI QTAEGAM  +  ++QRMR+L+LQSANGSNS  +R ++Q+E  AL+
Sbjct: 61  LSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALS 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGF--SYVA 178
            EL RIA TT+F GR LL+G F  +SFQ+GA+S E++   ++++ + S++ G +  + VA
Sbjct: 121 GELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMK-GNYNEASVA 179

Query: 179 AALADKQWQVT 189
             +A  Q  VT
Sbjct: 180 GGVATLQASVT 190



 Score =  115 bits (288), Expect = 4e-30
 Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 10/178 (5%)

Query: 209 IQIQAKEGDDIEELATYINGKTDKVSASV---NEKGQLQLY------IAGKETSGTLSFS 259
           ++++ K+GDD++ +A  IN  +  V+ASV        L L+      +A       L+  
Sbjct: 509 VEVKFKKGDDMDSIAASINAASTGVNASVVVNAGSSTLSLFADQDITVADGSNGTGLAAL 568

Query: 260 GSLANELQMNLLGYEA-VDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHA 318
           G  A   + + +  E+ V NL+I+ A  AQ+A+ V+D A++ +D  RS+LGA+QNRF   
Sbjct: 569 GLTAVAGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDST 628

Query: 319 ISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLL 376
           ++NL ++ EN  A+ SRI+DAD+A ET ++ KQQ LQQ ST++L+QA + P  VL LL
Sbjct: 629 VANLQSISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQANQLPSSVLKLL 686