Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  149 bits (375), Expect = 1e-40
 Identities = 117/375 (31%), Positives = 176/375 (46%), Gaps = 82/375 (21%)

Query: 3   MTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLG 62
           ++++TN ++L  Q  L +  + L  S+ RL +G RINSA DDAAGLQI+ R++ Q RG+ 
Sbjct: 2   LSLHTNYASLSTQNALGATQKTLTTSMSRLGTGFRINSAMDDAAGLQIATRMDAQSRGMA 61

Query: 63  IAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDE 122
           +A+RN  +GIS+MQTAEGA +E T ++ RM+DL+ ++ANGS       A QE+  AL  E
Sbjct: 62  VAMRNTQNGISMMQTAEGAFKEMTNIVTRMKDLATEAANGS-------ATQEDRDALQAE 114

Query: 123 LNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALA 182
            +++ E     G  + N  F          +GEA  L  ++  +  L  G  ++   A  
Sbjct: 115 FDQLGEEL---GNIMTNSSF----------AGEA--LFNKDGTAGKLGAGAVTFQIGATT 159

Query: 183 DKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQ 242
            +  +V                             D+ +    +    D V AS      
Sbjct: 160 AETMEV-----------------------------DVTDALADLGTDLDAVVAS------ 184

Query: 243 LQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVD 302
              Y AG  T+GT    GS                  +I++A  A  A+  +   L  + 
Sbjct: 185 ---YTAGV-TAGT---PGS------------------EIAAAADANTAIDDLADVLDAIG 219

Query: 303 GHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVL 362
             R++LGA  NR +   +NL N      AS  RI D DYA ET  M K Q+L Q STS+L
Sbjct: 220 AVRAQLGASSNRLESVYNNLGNQRTQTDASKGRIMDVDYAAETANMTKNQMLLQASTSML 279

Query: 363 AQAKRQPKFVLFLLR 377
            Q+    + V+ L++
Sbjct: 280 KQSSSMSQLVMSLMQ 294