Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  266 bits (679), Expect = 1e-75
 Identities = 163/403 (40%), Positives = 246/403 (61%), Gaps = 34/403 (8%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           T+NTNV ++ AQR+L + S  L  S++RLSSG R+NSAKDDAAGL IS R+  Q+RGL +
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLNV 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
           AVRNANDGIS+ QTAEGA+ +   +LQRMR+LS+QSAN SN++++R ALQ E+  L+ E+
Sbjct: 63  AVRNANDGISLAQTAEGALGKVGDMLQRMRELSVQSANASNNSSDRTALQAEVTQLSQEI 122

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQL-SLRNMRSDSL----EMG------ 172
           +R+A+TT+F G KLL+G F  A+FQ+GA++GE + + S+ +++ DS+     MG      
Sbjct: 123 DRVAKTTAFNGTKLLDGSFANATFQVGANAGEGIAIDSIVSVKLDSMGSPSSMGYTTIQV 182

Query: 173 GFSYVAAALADKQWQVTKGKQQLNISYVNAQGENEN------IQIQAKEGDDIEELATYI 226
               V  +L D    VT G  Q+N       G+N +      I+  A   +   ++   +
Sbjct: 183 STEMVLGSLTDLT-AVTAGTLQINA----VPGDNTSAVSLGAIKAAANATERAGQIVDAV 237

Query: 227 NGKTDKVSA----SVNEKGQLQLY------IAGKETSGTLSFSGSLANELQMNLLGYEAV 276
           N ++         S N  G L  Y       A    +    F+ +    LQ   +   A 
Sbjct: 238 NARSADTGVFAKLSYNAAGALTGYHLFSEKTAFSAAADLAGFNTAATGNLQAGAMFAGAY 297

Query: 277 D--NLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNS 334
           D   + ++SAGGAQ ++ +ID A+  V+  R+ LGA+Q+RF++A++N+    EN++A+  
Sbjct: 298 DMRGISVASAGGAQLSLKIIDKAINDVNSSRANLGALQSRFENAVANIQITGENISAARG 357

Query: 335 RIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           RI DAD+AKET+ + + QILQQ  T+++AQA +  + VL LLR
Sbjct: 358 RIVDADFAKETSSLSRAQILQQAGTAMVAQANQAQQGVLSLLR 400