Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  253 bits (647), Expect = 5e-72
 Identities = 152/388 (39%), Positives = 230/388 (59%), Gaps = 14/388 (3%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           T+NTNV ++ AQR+L + S  L  S++RLSSG R+NSAKDDAAGL IS R+  Q+RGL +
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSV 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
           A RNANDGIS+ QTAEGA+ +   +LQRMR+L++QSAN SN++++R ALQ E+  L  E+
Sbjct: 63  AARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEI 122

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQL-SLRNMRSDSL-EMGGFSYVAAAL 181
           +R+A+TTSF G KLL+G F  A+FQ+GA++GE + + S+ +  S +L ++    +  AA+
Sbjct: 123 DRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTALGQLSATEHFVAAV 182

Query: 182 ADKQWQVTKG--KQQLNISYVNAQGEN---ENIQIQAKEGDDIEELATYINGKTDKVSAS 236
           A                 S  NA G +     I           ++   IN K+      
Sbjct: 183 AAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTTQVVDAINAKSADTGVF 242

Query: 237 VNEKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEA-------VDNLDISSAGGAQR 289
             E G     I         +  G+          G  A       +  ++++S G AQ+
Sbjct: 243 ARETGAGAYEIFSSRDLTAATDFGAAFTAAATGAPGDTAPPGTLTTLSAINVNSFGDAQK 302

Query: 290 AVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMI 349
           A+ VID A+  ++  R++LGA+Q+RF++A++N+    EN++A+  RI DAD+AKET+ + 
Sbjct: 303 ALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKETSNLS 362

Query: 350 KQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           + QILQQ  T+++AQA +  + VL LLR
Sbjct: 363 RAQILQQAGTAMVAQANQAQQGVLSLLR 390