Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  260 bits (665), Expect = 4e-74
 Identities = 159/392 (40%), Positives = 239/392 (60%), Gaps = 31/392 (7%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           T+NTNV ++ AQR+L + S  L  S++RLSSG R+NSAKDDAAGL IS R+  Q+RGL +
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSV 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
           A RNANDGIS+ QTAEGA+ +   +LQRMR+L++QSAN SN++++R ALQ E+  L  E+
Sbjct: 63  ASRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEI 122

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA--- 180
           +R+A+TTSF G KLL+G F  A+FQ+GA++GE + +    + ++S  +G  S V  A   
Sbjct: 123 DRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANSTSLGNTSLVTGAGTI 181

Query: 181 -------LADKQWQVTKGKQQLNISYVNAQGENENIQ----IQAKEGDD-IEELATYING 228
                  +A     +T     L      A       Q    I AK  D  +   ATY  G
Sbjct: 182 TSTAGANVAIAAGALTVKGTALGPIAAAASAAERTTQVVDAINAKSSDTGVFARATYTAG 241

Query: 229 KTDKVSASVNEKGQLQLYIAGKETS---GTLSFSGSLANELQMNLLGYEAVDNLDISSAG 285
                      +G + +   G  T+   GT++   + A++L          D++++SS G
Sbjct: 242 VA--TGFETFSEGAIAVADFGGFTAAATGTVAVGAAAASQL----------DDINVSSFG 289

Query: 286 GAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKET 345
            AQ+A+ VID A+  ++  R++LGA+Q+RF++A++N+    EN++A+  RI DAD+AKET
Sbjct: 290 DAQKALKVIDNAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKET 349

Query: 346 TQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           + + + QILQQ  T+++AQA +  + VL LLR
Sbjct: 350 SNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 381