Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  252 bits (643), Expect = 1e-71
 Identities = 155/397 (39%), Positives = 235/397 (59%), Gaps = 26/397 (6%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           T+NTNV ++ AQR+L+S++  L  S++RLSSG R+NSAKDDAAGL IS R+ TQ+RGL +
Sbjct: 3   TINTNVMSMNAQRNLSSSASSLATSMQRLSSGLRVNSAKDDAAGLAISERMNTQVRGLNV 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
           A RNANDGIS+ QTAEGA+ +   +LQRMR+L++QSAN SN+ ++R AL  E+  L  E+
Sbjct: 63  AARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNGSDRTALNAEVQQLRQEI 122

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQL-SLRNMRSDSLEMGGFSYV----- 177
           +R+A+TTSF G KLL+G F  A+FQ+GA++GE + + S+ N  S +L             
Sbjct: 123 DRVAKTTSFNGTKLLDGSFANATFQVGANAGEGISIDSIVNSNSAALGQTAVHVTPKIVP 182

Query: 178 -AAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSAS 236
            A  +A              +S  +A G   N+        +   LA       D ++A 
Sbjct: 183 PATPVAPAVLAAIPAGGATPLSIDDANGNAVNL----GPIGEATTLAQRAGQMVDAINAK 238

Query: 237 VNEKGQL--QLYIAG---------KETSGTLSFSGSLANELQMNLLGYEAVD----NLDI 281
            ++ G      Y AG         +       F    A      +    AVD    ++++
Sbjct: 239 SSDTGVFARPTYTAGVMDGYEVFAERAVVAADFGNFAAGTTGAGVNTAAAVDSFVEDINV 298

Query: 282 SSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADY 341
           +S G +Q A+ VID A+  ++  R++LGA+Q+RF++A++N+    EN++A+  RI DAD+
Sbjct: 299 NSFGDSQLALKVIDNAINAINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADF 358

Query: 342 AKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLRN 378
           AKET+ + + QILQQ  T+++AQA + P+ VL LLR+
Sbjct: 359 AKETSNLSRAQILQQAGTAMVAQANQIPQGVLSLLRS 395