Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Flagellin from Methylophilus sp. DMC18

 Score =  154 bits (388), Expect = 4e-42
 Identities = 81/181 (44%), Positives = 120/181 (66%), Gaps = 2/181 (1%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN+++L AQR+LN++   LNQS++RLSSG RINSAKDDAAG+ I+ R+++Q+RG
Sbjct: 1   MASVINTNIASLNAQRNLNASQTGLNQSIQRLSSGLRINSAKDDAAGMAIATRMDSQIRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
             +A+RN+ND IS +Q  EG + + T  LQRMR+L++Q+ANGS  + +R  L  E   L 
Sbjct: 61  SDVAIRNSNDAISYLQVTEGGLSKATDALQRMRELAVQAANGSYGSGDRANLNTEFTQLT 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
            EL+R++ +T F G  +  G     +FQIG+ S + +Q+S     S S  +   S   AA
Sbjct: 121 SELSRLSTSTQFNGLNVFGGS--GYTFQIGSGSADTLQVSAVTAASISGNVSTVSDATAA 178

Query: 181 L 181
           +
Sbjct: 179 I 179



 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 255 TLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNR 314
           T       A+ LQ++ +   ++   ++S+   A  A++ ID  L  V+  R+ LGA QNR
Sbjct: 144 TFQIGSGSADTLQVSAVTAASISG-NVSTVSDATAAITAIDAQLDAVNTSRASLGAYQNR 202

Query: 315 FQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLF 374
           F+  +S+L    EN++A+ SRI DAD+A ET +M + QILQQ  T++LAQA + P  V+ 
Sbjct: 203 FEAVVSSLQVNVENISAAKSRITDADFASETAKMTRNQILQQAGTAMLAQANQLPNSVMS 262

Query: 375 LLR 377
           LLR
Sbjct: 263 LLR 265