Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., flagellin (NCBI) from Escherichia coli BW25113

 Score =  144 bits (362), Expect = 7e-39
 Identities = 75/177 (42%), Positives = 116/177 (65%), Gaps = 5/177 (2%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN  +L+ Q ++N     L+ S+ERLSSG RINSAKDDAAG  I+NR  + ++G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGIS+ QT EGA+ E    LQR+R+L++Q+  G+NS ++  ++Q+E+ +  
Sbjct: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRL 120

Query: 121 DELNRIAETTSFAGRKLL--NGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFS 175
           DE++R++  T F G  +L  NG       Q+GA+  + + + L+ + + +L + GFS
Sbjct: 121 DEIDRVSGQTQFNGVNVLAKNGSM---KIQVGANDNQTITIDLKQIDAKTLGLDGFS 174



 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 43/87 (49%), Positives = 59/87 (67%)

Query: 291 VSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIK 350
           +  +D A+  VD  RS LGA+QNR   A++NL+N   NL+ + SRI+DADYA E + M K
Sbjct: 411 LKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSK 470

Query: 351 QQILQQVSTSVLAQAKRQPKFVLFLLR 377
            QI+QQ   SVLA+A + P+ VL LL+
Sbjct: 471 AQIIQQAGNSVLAKANQVPQQVLSLLQ 497