Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region from Enterobacter asburiae PDN3

 Score =  153 bits (387), Expect = 5e-42
 Identities = 78/171 (45%), Positives = 117/171 (68%), Gaps = 3/171 (1%)

Query: 5   VNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGIA 64
           +NTN+ +L  Q +LN +   L  ++ERLSSG RINSAKDDAAG  I+NR+ +Q++G+  A
Sbjct: 4   INTNLMSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQIKGMTQA 63

Query: 65  VRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELN 124
            RNANDGIS+ QTAEG++ E    LQR+R+L++Q++NG+NS ++  +LQ+E+ A   E+N
Sbjct: 64  ARNANDGISMAQTAEGSLNEINNNLQRVRELAVQASNGTNSTSDLASLQDEVTARLAEIN 123

Query: 125 RIAETTSFAGRKLLN---GQFMKASFQIGASSGEAVQLSLRNMRSDSLEMG 172
           R+A  T F G KLL+   G   K   Q+G + G+ + L L   ++D+  +G
Sbjct: 124 RVAGKTDFNGIKLLDGTAGTAGKVKIQVGVNDGDTIDLDLSGAKADTTTLG 174



 Score = 26.6 bits (57), Expect = 9e-04
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 11  ALVAQRHLNSASEMLNQSLE---RLSSGNRINSAKDDAAGLQISNRLETQMRGLGIAVRN 67
           A+ A    NS S++ +   E   RL+  NR+ + K D  G+++ +        + I V  
Sbjct: 95  AVQASNGTNSTSDLASLQDEVTARLAEINRV-AGKTDFNGIKLLDGTAGTAGKVKIQV-G 152

Query: 68  ANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVA 111
            NDG +I     GA  +TT L     DL   +A   ++  + +A
Sbjct: 153 VNDGDTIDLDLSGAKADTTTLGVNAIDLKAMTATDLDTIDKAIA 196