Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., flagellin FliC from Escherichia coli ECRC62

 Score =  206 bits (523), Expect = 1e-57
 Identities = 143/422 (33%), Positives = 216/422 (51%), Gaps = 48/422 (11%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN  +L+ Q ++N     L+ S+ERLSSG RINSAKDDAAG  I+NR  + ++G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGIS+ QT EGA+ E    LQR+R+L++Q+  G+NS ++  ++Q+E+ +  
Sbjct: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRL 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGF------ 174
           +E++R++  T F G  +L  +  K + Q+GA+ G+ + + L+ + S +L +  F      
Sbjct: 121 EEIDRVSSQTQFNGVNVL-AKDGKMNIQVGANDGQTITIDLKKIDSSTLNLSSFDATNLG 179

Query: 175 -SYVAAALADKQWQVTKG------------------------KQQLNISYVNAQGENENI 209
            S    A  +KQ  V  G                            N  Y +A+ +    
Sbjct: 180 TSVKDGATINKQVAVGAGDFKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAEVDTSKG 239

Query: 210 QI---QAKEGDDIEELATYIN--GKTDKVSASVNEKGQLQLYIAGKETSGT----LSFSG 260
           +I      E       AT +   G+  K+ AS  +    Q  +  K+ SG     +    
Sbjct: 240 EINFNSTNESGTPPTAATEVTTVGRDVKLDASALKAN--QSLVVYKDKSGNDAYIIQTKD 297

Query: 261 SLANELQMNLLGYEAVDNLDISSAGGAQR-----AVSVIDTALKYVDGHRSELGAMQNRF 315
              N+   N         L I ++  A        +  +D A+  VD  RS LGA+QNR 
Sbjct: 298 VTTNQSTFNAANISDAGVLSIGASTTAPSNLTADPLKALDDAIASVDKFRSSLGAVQNRL 357

Query: 316 QHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFL 375
             AI+NL+N   NL+ + SRI+DADYA E + M K QI+QQ   SVLA+A + P+ VL L
Sbjct: 358 DSAIANLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSL 417

Query: 376 LR 377
           L+
Sbjct: 418 LQ 419