Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., flagellin FliC from Escherichia coli ECRC101

 Score =  148 bits (374), Expect = 3e-40
 Identities = 76/175 (43%), Positives = 117/175 (66%), Gaps = 1/175 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN  +L+ Q ++N     L+ S+ERLSSG RINSAKDDAAG  I+NR  + ++G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGIS+ QT EGA+ E    LQR+R+L++Q+  G+NS ++  ++Q+E+ +  
Sbjct: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRL 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFS 175
           DE++R++  T F G  +L  +      Q+GA+ GE + + L+ + SD+L + GF+
Sbjct: 121 DEIDRVSGQTQFNGVNVL-AKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFN 174



 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 8/212 (3%)

Query: 172 GGFSYVAAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDD-----IEELATYI 226
           GG +Y A    D     TK     +    N+   ++ I   A E  D     +++     
Sbjct: 375 GGITYQATVSKDVVLSETKAAAATSSITFNSGVLSKTIGFTAGESSDAAKSYVDDKGGIT 434

Query: 227 NGKTDKVSASVN-EKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAG 285
           N     VS SVN + G + +      T     ++ ++   + +N  G    +     SA 
Sbjct: 435 NVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAPAIGTAVNVNSAGKITTETTSAGSA- 493

Query: 286 GAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKET 345
                ++ +D A+  +D  RS LGA+QNR   A++NL+N   NL+ + SRI+DADYA E 
Sbjct: 494 -TTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEV 552

Query: 346 TQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           + M K QI+QQ   SVLA+A + P+ VL LL+
Sbjct: 553 SNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQ 584