Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., flagellin FliC from Dickeya dadantii 3937

 Score =  131 bits (329), Expect = 3e-35
 Identities = 68/154 (44%), Positives = 100/154 (64%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M   +NTN  +L+AQ +LN +   L  ++ERLSSG  INSAKD+AAG  I N +  Q++G
Sbjct: 1   MMAVINTNSMSLLAQTNLNKSQSSLQTAIERLSSGLAINSAKDNAAGSGIVNGMTAQIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A +NANDG+S++QTAEG +      LQR+R+L++Q+AN +N   +R A+Q E+    
Sbjct: 61  LTQASKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQAANDTNGTNDRTAIQTEINRRV 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSG 154
           DE+NR+A + +F G+ LL+G      F I   +G
Sbjct: 121 DEINRVAASANFNGKALLDGTVTATGFNIQVGAG 154



 Score =  102 bits (254), Expect = 1e-26
 Identities = 83/251 (33%), Positives = 117/251 (46%), Gaps = 27/251 (10%)

Query: 152 SSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQVTKGKQQLNISYVNAQGENENIQ- 210
           SSG A+  +  N     + + G +     L         G   +  +  N    N+N+Q 
Sbjct: 33  SSGLAINSAKDNAAGSGI-VNGMTAQIKGLTQASKNANDGVSLVQTAEGNLDTINDNLQR 91

Query: 211 -----IQAKEG----DDIEELATYINGKTD---KVSASVNEKGQLQL------------Y 246
                +QA       +D   + T IN + D   +V+AS N  G+  L             
Sbjct: 92  IRELAVQAANDTNGTNDRTAIQTEINRRVDEINRVAASANFNGKALLDGTVTATGFNIQV 151

Query: 247 IAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDGHRS 306
            AG   +  +S   S         LG     N D+S+A GA   VS IDTAL+ ++  ++
Sbjct: 152 GAGTTANDAISVGSSALINATSGGLGITTT-NTDVSTAAGATALVSAIDTALQTINTAKA 210

Query: 307 ELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAK 366
            +GA  NRFQ  I NL N   NL+ + SRI+DADYA E + M + QILQQ  TSVLAQA 
Sbjct: 211 NIGATLNRFQSTIDNLSNTINNLSNARSRIQDADYATEVSNMSRAQILQQAGTSVLAQAN 270

Query: 367 RQPKFVLFLLR 377
           + P+ VL LL+
Sbjct: 271 QVPQTVLKLLQ 281