Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., A-type flagellin from Alteromonas macleodii MIT1002

 Score =  243 bits (621), Expect = 4e-69
 Identities = 149/379 (39%), Positives = 220/379 (58%), Gaps = 60/379 (15%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+TVNTNVS+L AQR L ++   L+++ ERLSSG RIN+A DDAAGLQISNRLE Q+ G
Sbjct: 1   MALTVNTNVSSLNAQRQLMNSGNSLDKAFERLSSGLRINNASDDAAGLQISNRLEGQING 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L    RNANDGIS+ QTAEGAM++ T   QR+R L+ Q+ANGSN+  +R+A+QEEM AL 
Sbjct: 61  LNQGNRNANDGISVAQTAEGAMEQITDSFQRVRTLAAQAANGSNTDEDRLAIQEEMRALM 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEM---GGFSYV 177
           +E+NR+A  T+F G  LL+G +    FQ+G+ + + +  S++N+   +  +   GGF+  
Sbjct: 121 EEVNRVAADTTFGGENLLDGTY-NGVFQVGSDAVQTIGFSMQNVGGSANTISAAGGFT-- 177

Query: 178 AAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASV 237
            + +A     +T G                            E L+  + G +D +    
Sbjct: 178 LSGIASIASAITGG----------------------------EALSAKLEGLSDSL---- 205

Query: 238 NEKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTA 297
                           GT + +G        +  G      + +S+   +Q  ++ +D+ 
Sbjct: 206 ----------------GTANLAG------DFDFAGVFVASGISVSTQANSQAVLAGMDSL 243

Query: 298 LKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQV 357
           +  VD  R+ELGA+QNRFQ  I+N  N+ ENL+A+ SRI+DAD+A ET ++ + QILQQ 
Sbjct: 244 IAVVDKKRAELGAVQNRFQSTINNQANISENLSAAQSRIRDADFAAETAKLTQNQILQQA 303

Query: 358 STSVLAQAKRQPKFVLFLL 376
           S ++LAQA ++P+  L LL
Sbjct: 304 SQAILAQANQRPQAALSLL 322