Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., A-type flagellin from Alteromonas macleodii MIT1002

 Score =  239 bits (609), Expect = 1e-67
 Identities = 150/380 (39%), Positives = 221/380 (58%), Gaps = 60/380 (15%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M++ VNTNVS+L AQR + S+S  L+Q+ ERLSSG RINSA DDAAGLQIS+RL++Q+ G
Sbjct: 1   MSLIVNTNVSSLNAQRQMMSSSLGLDQAFERLSSGLRINSAADDAAGLQISDRLQSQILG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L    RNANDGIS+ QTAEGAM+E T   QR+R L+ Q+ANGSN+  +R+A+QEE+ AL 
Sbjct: 61  LNQGNRNANDGISLAQTAEGAMEEITSSFQRVRTLASQAANGSNTDEDRLAIQEEIRALM 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEM---GGFSYV 177
            E+NRIA  T+F G  LL+G +    FQ+G+ + + +  S++N+   +  +   GGF+  
Sbjct: 121 TEVNRIAGDTTFGGENLLDGTY-NGVFQVGSDAVQTIGFSMQNVGGSANTISAAGGFT-- 177

Query: 178 AAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASV 237
            + +A     +T G                            E L+  + G +D +    
Sbjct: 178 LSGIASIASAITGG----------------------------EALSAKLEGLSDSL---- 205

Query: 238 NEKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTA 297
                           GT + +G        +  G      + +S+   +Q  ++ +D+ 
Sbjct: 206 ----------------GTANLAG------DFDFAGVFVASGISVSTQANSQAVLAGMDSL 243

Query: 298 LKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQV 357
           +  VD  R+ELGA+QNRFQ  I+N  N+ ENL+A+ SRIKDAD+A ET ++ + QILQQ 
Sbjct: 244 IAVVDKKRAELGAVQNRFQSTINNQANISENLSAAKSRIKDADFAAETAKLTQNQILQQA 303

Query: 358 STSVLAQAKRQPKFVLFLLR 377
           S ++LAQA ++P+  L LL+
Sbjct: 304 SQTILAQANQRPQAALSLLQ 323