Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., flagellin from Agrobacterium fabrum C58

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           ++ TN +A+ A + L + S  L  +  R+SSG R+ SA D+AA   I+  + +    L  
Sbjct: 3   SILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMALSA 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
                  G + +  A  AM+ T ++   ++++  +    +    ++  +QEE+  L  +L
Sbjct: 63  VQDALGLGAAKVDVAYSAMESTVEV---VKEIKSKIVAATEEGVDKTKIQEEIDQLKKQL 119

Query: 124 NRIAETTSFAGRKLLNG 140
             IA+  SF+G   L G
Sbjct: 120 ESIAQGASFSGENWLLG 136



 Score = 31.2 bits (69), Expect = 4e-05
 Identities = 19/84 (22%), Positives = 41/84 (48%)

Query: 294 IDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQI 353
           ++TA + +    + LG+++ R       +  + +++     R+ DAD  +E+T++   Q 
Sbjct: 229 VETAFQSISSASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKALQT 288

Query: 354 LQQVSTSVLAQAKRQPKFVLFLLR 377
            QQ+    L+ A    + +L L R
Sbjct: 289 QQQLGIQSLSIANTSSENILSLFR 312