Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  479 bits (1232), Expect = e-140
 Identities = 251/378 (66%), Positives = 298/378 (78%), Gaps = 2/378 (0%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           M +NVNTNV+AMTAQRYLT AT    TSMERLSSG +INSAKDDAAGLQISNRL  QSRG
Sbjct: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           LDVA+RNANDGISIAQTAEGAMNE+T+ILQRMRDL+LQSANG+NS SER A+ EE  AL 
Sbjct: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
           DELNRIAETTSFGG KLLNG+F   SFQIG+ +GEA+++ L  +R+D+  MGG S++A +
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
            K K+W V   A D+ F     DG    + + AK+GDDIEE+ATYINGQTD+ KASV+++
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQE 240

Query: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQA--GTAETVDTIDVTSVGGAQQSVAVIDSAL 298
           G+LQIF     + G+   SGGLA  L +    G   TV  ID+TSVGG+Q +V +ID+AL
Sbjct: 241 GKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAAL 300

Query: 299 KYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQAS 358
           KYVDS RA+LGA QNR +H+ISNL NI ENV ASKSRIKDTDFAKETT LTKSQIL QA 
Sbjct: 301 KYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAG 360

Query: 359 SSVLAQAKQAPNAALSLL 376
           +S+LAQAKQ PN+A+SLL
Sbjct: 361 TSILAQAKQLPNSAISLL 378