Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score =  607 bits (1565), Expect = e-178
 Identities = 310/377 (82%), Positives = 345/377 (91%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MAVNVNTNV+AMTAQRYLT ATNAQQ+SMERLSSG+KINSAKDDAAGLQISNRLNVQSRG
Sbjct: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L VAVRNANDGIS+AQTAEGAM ETTNILQRMRDLSLQSANGSNSK++RVAIQEEITALN
Sbjct: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
           DELNR+AETTSFGGNKLLNGTF+TKSFQIGADNGEAVML +KDMRSDN +MGG +Y AA 
Sbjct: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
           GKDK+W V+AG  D+T TLKD    D TI++NAKEGDDIEE+ATYINGQTDM+KASV+E+
Sbjct: 181 GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE 240

Query: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKY 300
           G+LQ+F  NN++ G   F G LAG L + A    TVDT+DVT+VGGAQ+SVA++D+ALKY
Sbjct: 241 GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKY 300

Query: 301 VDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360
           VDSHRAELGAFQNRFNHAI+NLDNINENVNASKSRIKDTDFAKETTALTK+QILSQASSS
Sbjct: 301 VDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSS 360

Query: 361 VLAQAKQAPNAALSLLG 377
           VLAQAKQAPN+AL+LLG
Sbjct: 361 VLAQAKQAPNSALALLG 377