Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  137 bits (345), Expect = 4e-37
 Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 9/246 (3%)

Query: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64
           + TN +A+ A      ++ A  T+MERLS+G +INSAKDDAAGL I++ +  Q +G+   
Sbjct: 4   IGTNSSALRATNASAASSKALSTAMERLSTGKRINSAKDDAAGLAIASSMTSQIKGMTQG 63

Query: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124
           +RNANDGIS+AQTAEGA+ E TN+LQRMR+L++Q+ N +N  + +  I+ EI  L  ++ 
Sbjct: 64  IRNANDGISLAQTAEGALGEVTNMLQRMRELTVQAGNDTNDDTAKGNIKSEIDQLATQIG 123

Query: 125 RIAETTSFGGNKLLNGTFSTKS-----FQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAA 179
           ++   TSF G KL +G+    S      Q GA++ +A+ + L ++  D  +    + V A
Sbjct: 124 KVLSDTSFNGIKLFDGSAGPASDGKINIQAGANSSDAIEIDLGNVEDDTDV---AAVVTA 180

Query: 180 EGKDKDWKVQAGANDITFTLKDIDGNDQTI-TVNAKEGDDIEEVATYINGQTDMVKASVN 238
                   V AG  D+   L   D   + I T  A  G     + + +N  T  V    +
Sbjct: 181 GATTTALDVTAGTFDVGAALDLYDSALKAIDTSRANLGAVQNRLESTVNTLTANVTNLTD 240

Query: 239 EKGQLQ 244
            K +++
Sbjct: 241 AKSRIE 246