Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Flagellin protein FlaA from Sphingobium sp. HT1-2

 Score =  190 bits (482), Expect = 6e-53
 Identities = 144/380 (37%), Positives = 199/380 (52%), Gaps = 30/380 (7%)

Query: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64
           + TN AA+ AQR +  AT AQ  + E+LS+G +INSAKDDAAG+ I+  +  Q RG++VA
Sbjct: 4   IGTNSAALRAQRAIEAATKAQGQASEKLSTGKRINSAKDDAAGMAIAQTMTSQLRGMEVA 63

Query: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124
            RNA D IS+ QTAEG + E  N LQRMR+L+LQ+ANG N   +R A+Q E+     ++N
Sbjct: 64  KRNAADAISLTQTAEGILGEVQNSLQRMRELTLQAANGVNRPEDRAALQTEMDQTVAQIN 123

Query: 125 RIAETTSFGG-NKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
            + + + F G N   N T  T +    AD G+ +         D  M    S V      
Sbjct: 124 ALLQNSEFNGVNLFSNTTQGTAARDYNAD-GDLLDYNGYGYYRDELMHSAGSTVI----- 177

Query: 184 KDWKVQAGAN---DITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
               VQAGAN   ++  TL  +  N    T+    G D+      +NG    V  S N  
Sbjct: 178 ---NVQAGANATDNVAITLPTLRSNSDDFTL---LGTDLA-----VNGTMRFVGIS-NID 225

Query: 241 GQLQIFAGNNKV--TGDVAFSGGL--AGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDS 296
             L    G   V  T D+  +G +   G +       ++   I VT    AQQ +AVID+
Sbjct: 226 LTLDYDVGVAAVHRTNDLGSTGWMDPEGYVAFTDSDYKSYAQIGVT----AQQGLAVIDA 281

Query: 297 ALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQ 356
           AL  + + R  LGA Q+R     S LD    N+  ++SRI+D DF+ E+T L KSQILSQ
Sbjct: 282 ALAQISTARVNLGAAQSRLESISSQLDTNIVNLTDARSRIEDADFSTESTTLAKSQILSQ 341

Query: 357 ASSSVLAQAKQAPNAALSLL 376
           A++++LAQA       L LL
Sbjct: 342 AATAMLAQANARQQDVLKLL 361