Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  282 bits (721), Expect = 1e-80
 Identities = 165/387 (42%), Positives = 241/387 (62%), Gaps = 25/387 (6%)

Query: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64
           +NTNV +MTAQR L   +++  TSM+RLSSG ++NSAKDDAAGL IS R+N Q RGL VA
Sbjct: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63

Query: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124
            RNANDGIS+AQTAEGA+ +  ++LQRMR+L++QSAN SN+ S+R A+Q E+T L  E++
Sbjct: 64  SRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123

Query: 125 RIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEG--- 181
           R+A+TTSF G KLL+GTF+  +FQ+GA+ GE + +    + +++  +G TS V   G   
Sbjct: 124 RVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANSTSLGNTSLVTGAGTIT 182

Query: 182 --KDKDWKVQAGA--------NDITFTLKDIDGNDQTI-TVNAKEGD-DIEEVATYINGQ 229
                +  + AGA          I       +   Q +  +NAK  D  +   ATY  G 
Sbjct: 183 STAGANVAIAAGALTVKGTALGPIAAAASAAERTTQVVDAINAKSSDTGVFARATYTAGV 242

Query: 230 TDMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQ 289
               +        +  F G         F+    G + + A  A  +D I+V+S G AQ+
Sbjct: 243 ATGFETFSEGAIAVADFGG---------FTAAATGTVAVGAAAASQLDDINVSSFGDAQK 293

Query: 290 SVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALT 349
           ++ VID+A+  ++S RA+LGA Q+RF +A++N+    EN++A++ RI D DFAKET+ L+
Sbjct: 294 ALKVIDNAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKETSNLS 353

Query: 350 KSQILSQASSSVLAQAKQAPNAALSLL 376
           ++QIL QA ++++AQA QA    LSLL
Sbjct: 354 RAQILQQAGTAMVAQANQAQQGVLSLL 380