Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  278 bits (711), Expect = 2e-79
 Identities = 159/381 (41%), Positives = 239/381 (62%), Gaps = 12/381 (3%)

Query: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64
           +NTNV +MTAQR L   +++  TSM+RLSSG ++NSAKDDAAGL IS R+N Q RGL VA
Sbjct: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63

Query: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124
            RNANDGIS+AQTAEGA+ +  ++LQRMR+L++QSAN SN+ S+R A+Q E+T L  E++
Sbjct: 64  SRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123

Query: 125 RIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDK 184
           R+A+TTSF G KLL+GTF+  +FQ+GA+ GE + +    + +++  +G TS   +     
Sbjct: 124 RVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANSASLGNTSLATSTSAIN 182

Query: 185 DWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTD----MVKASVNEK 240
           D          T T++ +      +   A E +   +V   IN ++       + + N  
Sbjct: 183 DGTALTAIAAGTLTVRGVALGPVAVATTAAERN--TQVVDAINAKSSDTGVFARTTYNAG 240

Query: 241 GQ---LQIFAGNNKVTGD-VAFSGGLAGALNMQAGTAET-VDTIDVTSVGGAQQSVAVID 295
           G     ++F+         V F     GA    +  A + ++ I V S G AQ+++ VID
Sbjct: 241 GAATGFEVFSDTAITAASFVGFGATTTGAAPADSAAATSQLEDISVNSFGDAQKALKVID 300

Query: 296 SALKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILS 355
           +A+  ++S RA+LGA Q+RF +A++N+    EN++A++ RI D DFAKET+ L+++QIL 
Sbjct: 301 TAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKETSNLSRAQILQ 360

Query: 356 QASSSVLAQAKQAPNAALSLL 376
           QA ++++AQA QA    LSLL
Sbjct: 361 QAGTAMVAQANQAQQGVLSLL 381