Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., flagellin from Dickeya dianthicola ME23

 Score =  137 bits (345), Expect = 4e-37
 Identities = 90/247 (36%), Positives = 137/247 (55%), Gaps = 10/247 (4%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MAV +NTN  ++ AQ  L  + ++ QT++ERLSSG  INSAKD+AAG  I N +  Q +G
Sbjct: 1   MAV-INTNSMSLLAQTNLNKSQSSLQTAIERLSSGLAINSAKDNAAGSGIVNGMTAQIKG 59

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
           L  A +NANDG+S+ QTAEG ++   + LQR+R+L++Q+AN +N  ++R AIQ EI    
Sbjct: 60  LTQASKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQAANDTNGTNDRTAIQTEINRRV 119

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAV--MLTLKDMRSDNRMMGGTSYVA 178
           DE+NR+A + +F G  LL+GT +   F I   +G      +++      N   GG     
Sbjct: 120 DEINRVAASANFNGKALLDGTVNATGFNIQVGSGTTANDAISVGSAALINATSGGLGITT 179

Query: 179 AEGKDKDWKVQAGANDITFTLKDIDGNDQTI-TVNAKEGDDIEEVATYINGQTDMVKASV 237
               + D    AG+   T  +  ID   QTI T  A  G  +    + I+  ++ +    
Sbjct: 180 T---NTDVSTAAGS---TALVSAIDTALQTINTAKANIGATLNRFQSTIDNLSNTINNLS 233

Query: 238 NEKGQLQ 244
           N + ++Q
Sbjct: 234 NARSRIQ 240



 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 28/288 (9%)

Query: 104 NSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKD 163
           N+ S  +  Q  +      L    E  S G   L   +    +   G  NG    +    
Sbjct: 5   NTNSMSLLAQTNLNKSQSSLQTAIERLSSG---LAINSAKDNAAGSGIVNGMTAQIKGLT 61

Query: 164 MRSDNRMMGGTSYVAAEG----------KDKDWKVQAGANDITFTLKDIDGNDQTI--TV 211
             S N   G +    AEG          + ++  VQA AND   T      ND+T   T 
Sbjct: 62  QASKNANDGVSLVQTAEGNLDTINDNLQRIRELAVQA-ANDTNGT------NDRTAIQTE 114

Query: 212 NAKEGDDIEEVATYIN-GQTDMVKASVNEKG-QLQIFAGNNKVTGDVAFSGGLAGALNMQ 269
             +  D+I  VA   N     ++  +VN  G  +Q+ +G    T + A S G A  +N  
Sbjct: 115 INRRVDEINRVAASANFNGKALLDGTVNATGFNIQVGSGT---TANDAISVGSAALINAT 171

Query: 270 AG-TAETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINEN 328
           +G    T    DV++  G+   V+ ID+AL+ +++ +A +GA  NRF   I NL N   N
Sbjct: 172 SGGLGITTTNTDVSTAAGSTALVSAIDTALQTINTAKANIGATLNRFQSTIDNLSNTINN 231

Query: 329 VNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSLL 376
           ++ ++SRI+D D+A E + ++++QIL QA +SVLAQA Q P   L LL
Sbjct: 232 LSNARSRIQDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLKLL 279