Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Flagellin B from Alteromonas macleodii MIT1002

 Score =  154 bits (388), Expect = 6e-42
 Identities = 140/437 (32%), Positives = 190/437 (43%), Gaps = 98/437 (22%)

Query: 24  AQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISIAQTAEGAMN 83
           A  T +ERLSSG +INSA DD+AGLQISNRL  + R      RN NDGIS AQ AEG + 
Sbjct: 20  ALSTRLERLSSGLRINSAADDSAGLQISNRLASEKRAYTQLNRNLNDGISYAQIAEGGLQ 79

Query: 84  ETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLNGTFS 143
           E+  ILQRMR L++QS NG NS S+R A+ +E   L + LN IA              ++
Sbjct: 80  ESAAILQRMRQLAIQSQNGINSVSDRAALDKEFQQLKNALNGIA--------------YN 125

Query: 144 TKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKDKDWKVQAGANDITFTLKDID 203
           T++F       ++ +L+       +    G +     G      + AG+ +I   L D  
Sbjct: 126 TEAFNRLPLVDDSDLLSANVPSISDTFTNGVNQSMTSGLRSIAYIPAGSTNIQINLNDNG 185

Query: 204 GND--QTITVNAKE--GDDIEEVATYINGQTDMVK---------------ASVNEKGQLQ 244
            ND  Q  TV+ K   G  +       NG ++                  AS ++   L 
Sbjct: 186 ANDDIQVFTVDGKHLAGTPLSAGTWNSNGISNSTSIESTFFLPTNGYEPTASYDDSNLLT 245

Query: 245 I----FAGNN-KVTGDVAFSGGL-------------------AGALNMQA---------G 271
           I      GN+   TGD   SG L                   +GA N+ A         G
Sbjct: 246 IGSATIDGNSISFTGDQNASGNLNETLTIASNAQPLIISVIGSGAFNVTASWTSLGNEGG 305

Query: 272 TAETVDTIDVTSV--------------------------------GGAQQSVAVIDSALK 299
              T+  +D+T+                                   A+ ++  IDSAL+
Sbjct: 306 PTFTLGPVDITATNQLGVGTDFIELTKTPATLTDLGLDGTSLQNESDAESALERIDSALQ 365

Query: 300 YVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASS 359
            V   RA  GA  N+   AI N     EN++ S S+I D DFA ET  LT++QI+ QAS 
Sbjct: 366 LVSESRAVYGAKINQMASAIRNNAIGFENISRSHSQITDADFASETALLTQAQIVEQASI 425

Query: 360 SVLAQAKQAPNAALSLL 376
           SV AQAK +    L LL
Sbjct: 426 SVRAQAKSSDEQVLGLL 442