Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., flagellin from Agrobacterium fabrum C58

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 78/372 (20%), Positives = 136/372 (36%), Gaps = 64/372 (17%)

Query: 4   NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
           ++ TN AAM+A + L   +   + +  R+SSG ++ SA D+AA   I+  +   +  L  
Sbjct: 3   SILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMALSA 62

Query: 64  AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
                  G +    A  AM  T  +++ ++   + +      K++   IQEEI  L  +L
Sbjct: 63  VQDALGLGAAKVDVAYSAMESTVEVVKEIKSKIVAATEEGVDKTK---IQEEIDQLKKQL 119

Query: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183
             IA+  SF G   L GT                              G  + V+   +D
Sbjct: 120 ESIAQGASFSGENWLLGT------------------------------GAKTVVSGFVRD 149

Query: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243
               V     D T     ID    T T N   G       T      D  K  + + G  
Sbjct: 150 GGGTVSVTKTDYTL----IDTTAGTTTANVLFG------LTGSPATLDTTKGIIGQPG-- 197

Query: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVDS 303
                          SG     ++++   + T  T  + ++      +  +++A + + S
Sbjct: 198 -------------TASGISVWDIDLKLFNSATPPTYTIGNL------LTDVETAFQSISS 238

Query: 304 HRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLA 363
             A LG+ + R       +  + ++++    R+ D D  +E+T L   Q   Q     L+
Sbjct: 239 ASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKALQTQQQLGIQSLS 298

Query: 364 QAKQAPNAALSL 375
            A  +    LSL
Sbjct: 299 IANTSSENILSL 310