Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  470 bits (1210), Expect = e-137
 Identities = 246/378 (65%), Positives = 302/378 (79%), Gaps = 3/378 (0%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           M INVNTNVSAMTAQRYL  A   +  SMERLSSG +INSA+DDAAGLQISNRLT+QSRG
Sbjct: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           LD+A++NANDGISIAQTAEGAMNE+T+ILQRMRDLALQS+NG+NS+SER+A+ EE  AL 
Sbjct: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120

Query: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQE 180
           DELNRIAETTSFGG KLLNGSFG  SFQIG+ SGEA+++ + S+R+D   MGG+S+ A++
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180

Query: 181 GKAADWRV-GAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGED 239
            K  +W V   A DL   +T K GEA  + I AK GDD+EELATYINGQT+  KASV ++
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQE 240

Query: 240 GKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNV--TVADVNVSTVAGSQEAVSILDGAL 297
           GKLQ+F +   + G+  I GGL  E+G + G  V  TV D+++++V GSQ AV I+D AL
Sbjct: 241 GKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAAL 300

Query: 298 KAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQAS 357
           K VDSQRA LGA QNR  H+ISNL N+ ENV AS+SRI+DTD+A+ETT +TK+QILQQA 
Sbjct: 301 KYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAG 360

Query: 358 TSVLAQAKQSPSAALSLL 375
           TS+LAQAKQ P++A+SLL
Sbjct: 361 TSILAQAKQLPNSAISLL 378