Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  263 bits (671), Expect = 8e-75
 Identities = 154/392 (39%), Positives = 244/392 (62%), Gaps = 27/392 (6%)

Query: 5   VNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDMA 64
           +NTNV +MTAQR L   +  +  SM+RLSSG ++NSA+DDAAGL IS R+ +Q RGL +A
Sbjct: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63

Query: 65  VKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDELN 124
            +NANDGIS+AQTAEGA+ +  ++LQRMR+LA+QS+N SN+SS+R A+Q EV+ L  E++
Sbjct: 64  ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123

Query: 125 RIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR------- 177
           R+A+TTSF G KLL+G+F + +FQ+GA++GE + +    + +++ A+G  S         
Sbjct: 124 RVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANSTALGQLSATEHFVAAV 182

Query: 178 AQEGKAADWRVGAATDLTLSYTNKQGEAREVTI-----NAKQGDDLEELATYINGQTEDV 232
           A    AA+  + A    T  ++ K     +V +     +        ++   IN ++ D 
Sbjct: 183 AAPSTAANAAIPAG---TAGWSIKNAAGVDVALGGIGASTTAAQRTTQVVDAINAKSADT 239

Query: 233 KASVGED--GKLQLFASSQKVNGDVTIGG-------GLGGEIGFDAGRNVTVADVNVSTV 283
                E   G  ++F SS+ +      G        G  G+     G   T++ +NV++ 
Sbjct: 240 GVFARETGAGAYEIF-SSRDLTAATDFGAAFTAAATGAPGDTA-PPGTLTTLSAINVNSF 297

Query: 284 AGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARE 343
             +Q+A+ ++D A+ +++S RA LGA Q+RF +A++N+    EN++A+R RI D D+A+E
Sbjct: 298 GDAQKALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKE 357

Query: 344 TTAMTKAQILQQASTSVLAQAKQSPSAALSLL 375
           T+ +++AQILQQA T+++AQA Q+    LSLL
Sbjct: 358 TSNLSRAQILQQAGTAMVAQANQAQQGVLSLL 389