Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Flagellin B from Alteromonas macleodii MIT1002

 Score =  152 bits (383), Expect = 2e-41
 Identities = 134/447 (29%), Positives = 193/447 (43%), Gaps = 80/447 (17%)

Query: 3   INVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLD 62
           ++V+ N  ++      N A   +   +ERLSSG +INSA DD+AGLQISNRL S+ R   
Sbjct: 2   LSVSGNYQSLGLSTLQNTA---LSTRLERLSSGLRINSAADDSAGLQISNRLASEKRAYT 58

Query: 63  MAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDE 122
              +N NDGIS AQ AEG + E+  ILQRMR LA+QS NG NS S+R A+ +E   L + 
Sbjct: 59  QLNRNLNDGISYAQIAEGGLQESAAILQRMRQLAIQSQNGINSVSDRAALDKEFQQLKNA 118

Query: 123 LNRIA--------------------------ETTSFGGNKLLNGSFGSKSFQIGADSGEA 156
           LN IA                          +T + G N+ +     S ++     +   
Sbjct: 119 LNGIAYNTEAFNRLPLVDDSDLLSANVPSISDTFTNGVNQSMTSGLRSIAYIPAGSTNIQ 178

Query: 157 VMLSMGSMRSDTQ--AMGGKSYRAQEGKAADWRVGAATD--------------------- 193
           + L+      D Q   + GK        A  W     ++                     
Sbjct: 179 INLNDNGANDDIQVFTVDGKHLAGTPLSAGTWNSNGISNSTSIESTFFLPTNGYEPTASY 238

Query: 194 -----LTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDGKLQLFASS 248
                LT+      G +   T +     +L E  T I    + +  SV   G   + AS 
Sbjct: 239 DDSNLLTIGSATIDGNSISFTGDQNASGNLNETLT-IASNAQPLIISVIGSGAFNVTASW 297

Query: 249 QKVNG-----------DVTIGGGLGGEIGFD----AGRNVTVADV-----NVSTVAGSQE 288
             +             D+T    LG  +G D         T+ D+     ++   + ++ 
Sbjct: 298 TSLGNEGGPTFTLGPVDITATNQLG--VGTDFIELTKTPATLTDLGLDGTSLQNESDAES 355

Query: 289 AVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMT 348
           A+  +D AL+ V   RA  GA  N+   AI N     EN++ S S+I D D+A ET  +T
Sbjct: 356 ALERIDSALQLVSESRAVYGAKINQMASAIRNNAIGFENISRSHSQITDADFASETALLT 415

Query: 349 KAQILQQASTSVLAQAKQSPSAALSLL 375
           +AQI++QAS SV AQAK S    L LL
Sbjct: 416 QAQIVEQASISVRAQAKSSDEQVLGLL 442