Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., A-type flagellin from Alteromonas macleodii MIT1002

 Score =  251 bits (642), Expect = 2e-71
 Identities = 163/377 (43%), Positives = 224/377 (59%), Gaps = 57/377 (15%)

Query: 1   MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
           M++ VNTNVS++ AQR +  ++ G+ ++ ERLSSG +INSA DDAAGLQIS+RL SQ  G
Sbjct: 1   MSLIVNTNVSSLNAQRQMMSSSLGLDQAFERLSSGLRINSAADDAAGLQISDRLQSQILG 60

Query: 61  LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
           L+   +NANDGIS+AQTAEGAM E T+  QR+R LA Q++NGSN+  +R AIQEE+ AL 
Sbjct: 61  LNQGNRNANDGISLAQTAEGAMEEITSSFQRVRTLASQAANGSNTDEDRLAIQEEIRALM 120

Query: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQE 180
            E+NRIA  T+FGG  LL+G++    FQ+G+D+ + +  SM       Q +GG +     
Sbjct: 121 TEVNRIAGDTTFGGENLLDGTYNG-VFQVGSDAVQTIGFSM-------QNVGGSAN---- 168

Query: 181 GKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDG 240
                  + AA   TLS                    +  +A+ I G         GE  
Sbjct: 169 ------TISAAGGFTLS-------------------GIASIASAITG---------GE-- 192

Query: 241 KLQLFASSQKVNG--DVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALK 298
                A S K+ G  D      L G+  FD       + ++VST A SQ  ++ +D  + 
Sbjct: 193 -----ALSAKLEGLSDSLGTANLAGD--FDFAGVFVASGISVSTQANSQAVLAGMDSLIA 245

Query: 299 AVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQAST 358
            VD +RA LGA QNRF   I+N  N++EN++A++SRI+D D+A ET  +T+ QILQQAS 
Sbjct: 246 VVDKKRAELGAVQNRFQSTINNQANISENLSAAKSRIKDADFAAETAKLTQNQILQQASQ 305

Query: 359 SVLAQAKQSPSAALSLL 375
           ++LAQA Q P AALSLL
Sbjct: 306 TILAQANQRPQAALSLL 322