Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., flagellin protein FlaD from Agrobacterium fabrum C58

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 95/438 (21%), Positives = 171/438 (39%), Gaps = 79/438 (18%)

Query: 4   NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
           ++ TN +AM A + L      ++ +  R+SSG+++ +A D+AA   I+  + S +  L  
Sbjct: 3   SILTNAAAMAALQTLRMIDKNLETTQARVSSGFRVETAADNAAYWSIATTMRSDNSALSA 62

Query: 64  AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
                  G +   TA  A+  T  ++++++   L ++ G    ++R  IQ+E+  L ++L
Sbjct: 63  VQDALGLGAAKVDTAYDALESTIEVVKQIK-AKLVAAYG--VGADRGKIQDEIKQLQEQL 119

Query: 124 NRIAETTSFGGNKLL----------------------------NGSFGSKSFQIGADSGE 155
             I+E+ SF G   L                            +G+ G  +     DS  
Sbjct: 120 KSISESASFSGENWLQASISNSGTPPVAESITKKVVASFTRTGSGNVGVTTVDYTLDSST 179

Query: 156 AVM-LSMGSM-----------RSDTQAM-----GGKSYRA--QEGKAADWRVGAATDLTL 196
            +  LS G +           +++T+ M      GK+ +A     K +D ++GA    T 
Sbjct: 180 VLFDLSGGKLGILDKNAVFVSKTETEVMQTSTTAGKTSQAGYVVEKLSDAQIGALNATTT 239

Query: 197 S-------YTNKQGE---------AREVTINAKQGDDLEELATYINGQTE---DVKASVG 237
                   Y+N              +    N   G      A    G T+   DV A   
Sbjct: 240 DTNTDPNLYSNGTDNYLRLAENVWVKATATNPSSGGTTVSPAYRDTGSTDWFYDVSAGTA 299

Query: 238 EDGKLQLFASSQKVNGDV-TIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGA 296
              +   F+ S    G++  +   +GG  G   G   T AD            +S +D  
Sbjct: 300 SANRSLGFSVSTLDLGNLDVVAAAMGGFAG--GGTTYTGAD-------AIDMMMSFVDKQ 350

Query: 297 LKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQA 356
           L+A+ S  +SLG+ Q+R     + + ++ + ++    R+ D D   E+T +   Q  QQ 
Sbjct: 351 LEAMTSTASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEESTRLKALQTQQQL 410

Query: 357 STSVLAQAKQSPSAALSL 374
               L+ A  +    L L
Sbjct: 411 GIQALSIANANAENILQL 428