Pairwise Alignments

Query, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., flaB from Agrobacterium fabrum C58

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 80/371 (21%), Positives = 138/371 (37%), Gaps = 55/371 (14%)

Query: 4   NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63
           ++ TNV+AM+A + L      M+ +  R+SSG ++  A D+AA   I+  + S +  L  
Sbjct: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSS 62

Query: 64  AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123
                  G +   TA   M+   ++   ++++  +    +    +R  +QEE+  L  +L
Sbjct: 63  VSDALGLGAAKVDTASAGMSSAIDV---VKEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119

Query: 124 NRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGKA 183
             I++  SF G   L G     +   G D  ++V+          +A G           
Sbjct: 120 ASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGF------VRASG----------- 162

Query: 184 ADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDGKLQ 243
                GA +  T  Y         V   +  G             T D    +G  G   
Sbjct: 163 -----GAVSVTTTKYALDNTATGNVLFGSVDGTG-----------TPDASGILGTVGTFT 206

Query: 244 LFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQ 303
             A+      D+T                   AD          EA+++++ +LKA+ S 
Sbjct: 207 TVAAQSVYTLDIT---------------QYAAAD----RATNMAEALTLVENSLKAMTSA 247

Query: 304 RASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQ 363
            A LG+   R G        ++++V     R+ D D   E+T +   Q  QQ     L+ 
Sbjct: 248 AAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSI 307

Query: 364 AKQSPSAALSL 374
           A  +  + LSL
Sbjct: 308 ANSNSESILSL 318