Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Flagellar hook-associated protein FliD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 69.3 bits (168), Expect = 4e-16
 Identities = 99/426 (23%), Positives = 162/426 (38%), Gaps = 38/426 (8%)

Query: 268 AGEALNAGELTESAVKAAANAASEA---KKYIRPEDRIPGWTETASGTLLDS-----YWE 319
           A EA NAG     +  AA N A +A   KK +         +  A+GT   S     Y  
Sbjct: 30  AAEATNAGYTRLRSALAAFNTAMDALSGKKGLVKNSATVAGSSGATGTASASAQPGTYSF 89

Query: 320 PEEELDAQGQKKAADVPGWSNTASGTLLDSYVTPQEAQQKLEQKLAQEKAQI-------- 371
             E + +  Q   AD+P       G L+            L    A     I        
Sbjct: 90  FVEAVASNHQIAFADLPAVPVATGGPLVIQQADGSSFNVNLLMADADGNGTISQTEIARA 149

Query: 372 --EAAIRSGKMTPEEAKAQARAKLSPEERAYIEQVEKAQAALNAAQSAFDGYGGMT--EV 427
             +A+  +GK+T +       ++L     A  E  +    A      A       T  E+
Sbjct: 150 INQASGNAGKVTAQVVNTGNGSQLILSSGASGEDGKITVDASGLPAGALKDALSATPNEL 209

Query: 428 QSAQDSMVVLD----GVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEYDRERV 483
             A+D++V L     GV    ++N +   AI+GV L+L         PA + +  D    
Sbjct: 210 AQARDAVVWLGDQGTGVRIQQASNTV--TAIDGVTLSLTRAMTTGDAPATLTVAADDAGT 267

Query: 484 RNDIEQFVAAYNQFFQTSKELAGVDPRTGQAGPLAGDSIVRSADSRLKTVFSSSIEQAPE 543
            +++  FV A+N       +L   D      G  A DS +R+  +RL  +          
Sbjct: 268 ADNVRSFVTAFNTLQGVINDLTKTDINAATRGVFASDSSIRALRTRLNDMVRQDFGGV-- 325

Query: 544 NLKSLTEFGITTTRQGTLEINYAMLDRQLNNNFTKLGEFFGGN-----QGFAKRVEDAIS 598
               L+E GI+T RQG L  + A L + L+     L + FG +      G    +   + 
Sbjct: 326 ---RLSELGISTDRQGALTFDAAKLKKTLDVKPDALDKLFGSSSLSAPSGLLGSMNTYLK 382

Query: 599 S-MTGVTGSIRTREKSLNEQTYRLDDDQRSLDRRMESLEKRTHAKFSAMQDATSKMQSQL 657
           + +   TG I+ R++S+  Q   +   Q  LD +     +R   +F+ +Q    ++ +Q 
Sbjct: 383 TWLDSGTGQIKRRQESVQIQQRDITKRQERLDEQFAMSYERYLLQFTQLQSLMGQL-NQT 441

Query: 658 AGMMNA 663
           +GM  +
Sbjct: 442 SGMFGS 447



 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 11/198 (5%)

Query: 13  DING--MVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLMTQFRQEKAF 70
           DIN   M +++ +      Q  I  +    + + + Y RLR +L      M     +K  
Sbjct: 2   DINPTQMATQLATIYTQGTQDIITRDSKAAEATNAGYTRLRSALAAFNTAMDALSGKKGL 61

Query: 71  AVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKFGPGKLHISLG 130
                  +     + TA+  A  G YS  V  +A +H+IA   L        G L I   
Sbjct: 62  VKNSATVAGSSGATGTASASAQPGTYSFFVEAVASNHQIAFADLPAVPVATGGPLVIQQA 121

Query: 131 DKS------FTLDVQGNSKL--VDIVRGINGEKSNPG-VRASIINDVEGPRLIVASNVSG 181
           D S         D  GN  +   +I R IN    N G V A ++N   G +LI++S  SG
Sbjct: 122 DGSSFNVNLLMADADGNGTISQTEIARAINQASGNAGKVTAQVVNTGNGSQLILSSGASG 181

Query: 182 KDHSVKMSAQAEPGNPLK 199
           +D  + + A   P   LK
Sbjct: 182 EDGKITVDASGLPAGALK 199