Pairwise Alignments

Query, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Flagellar hook-associated protein 2 from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 17/248 (6%)

Query: 419 DGYGGMTEVQSAQDSMVVLDGVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEY 478
           D   GM E  +AQ++ + ++ V  + +++N I +++E + L L   T  NQ    + I  
Sbjct: 213 DSSNGMIESVTAQNAKLTVNNVE-IENSSNTISDSLEDITLNLNDVTTGNQT---LTISK 268

Query: 479 DRERVRNDIEQFVAAYNQFFQTSKEL-------AGVDPRTGQAGPLAGDSIVRSADSRLK 531
           D  +  N ++ +V AYN    T   L       AG + +    G L GDS +R+  ++LK
Sbjct: 269 DTSKAENAVKAWVDAYNTLQDTFSSLTKYTAVDAGAESQDSSNGALLGDSTLRTIQTQLK 328

Query: 532 TVFSSSIEQAPENLKSLTEFGITT-TRQGTLEINYAMLDRQLNNNFTKLGEFF---GGNQ 587
           T+ +++   +  N K+L + GIT+    G LEI    L   L N+   +GE F   G + 
Sbjct: 329 TLLANT--HSSSNYKTLAQIGITSDASTGKLEIATDKLQTALKNDAAGIGEMFIGDGKST 386

Query: 588 GFAKRVEDAISSMTGVTGSIRTREKSLNEQTYRLDDDQRSLDRRMESLEKRTHAKFSAMQ 647
           G    + + ++S    TG I+  +  +++    L D   +   R+++L  R  A+F+ + 
Sbjct: 387 GVTTGISNNLTSWLSSTGIIQAAKDGVSKTLNNLTDQYNAASERIDTLMTRYKAQFTQLD 446

Query: 648 DATSKMQS 655
              + + S
Sbjct: 447 VLMNSLNS 454



 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 12/200 (6%)

Query: 2   SLGPMGMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLM 61
           S+  +G+ +G D++ ++  + +AE+      I  ++++    +SAYG L+ +L++ +   
Sbjct: 3   SISTLGVGSGLDLSSILDSLEAAEKSTLTP-ISKQQSSYTAKLSAYGTLKSALESFQTAN 61

Query: 62  TQFRQEKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKFG 121
           T   +   F      TS+    SAT T  AIAG Y++ V QLAQ+  + ++   KD+K  
Sbjct: 62  TALNKADLFTATST-TSSSSAFSATTTGSAIAGKYTISVSQLAQAQTLTTKNSQKDSKAA 120

Query: 122 PGKLHISL------GDKSFTLDVQ-GNSKLVDIVRGINGEKSNPGVRASIINDVEGP-RL 173
                  L      G    T+D+  GNS L  I   IN  K+  GV ASIIN   G  RL
Sbjct: 121 IATSDSVLTIQQGGGKDPVTIDISAGNSSLSGIRDAINNAKA--GVSASIINVGNGEYRL 178

Query: 174 IVASNVSGKDHSVKMSAQAE 193
            + +N +G ++++K+S   +
Sbjct: 179 SITANDTGSNNAMKLSVSGD 198