Pairwise Alignments

Query, 136 a.a., flagellar protein FliS from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., flagellar biosynthesis protein FliS from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 5e-29
 Identities = 54/121 (44%), Positives = 80/121 (66%), Gaps = 2/121 (1%)

Query: 4   SLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKALDII 63
           +L+ Y+KV+  +Q+S ASPH++VQMLM G ++R+ Q K A+ +G+I  KG  LGKA+DII
Sbjct: 6   ALRQYQKVNSHAQISEASPHRLVQMLMEGGLDRMAQAKGALARGDIAQKGLMLGKAIDII 65

Query: 64  ISLRSCLSMEDGGDIA--KNLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWDQ 121
           I LR  L  E   D A  + L+ LY +M N++ +AN  ND  M+D+V  ++  +K  WD 
Sbjct: 66  IGLRDGLDAEKSEDPAYVQQLESLYAYMTNRLMEANLHNDASMIDEVARLLITVKEGWDA 125

Query: 122 I 122
           I
Sbjct: 126 I 126