Pairwise Alignments

Query, 136 a.a., flagellar protein FliS from Vibrio cholerae E7946 ATCC 55056

Subject, 139 a.a., Flagellar biosynthesis protein FliS from Variovorax sp. SCN45

 Score = 79.0 bits (193), Expect = 3e-20
 Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 5/127 (3%)

Query: 1   MRGSLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKAL 60
           MR    AY +V V++ + +ASPH+++ ML  GA   +   +  M  G I  KG+ + KA+
Sbjct: 7   MRTGAGAYARVGVETSVMSASPHQLIVMLFDGAKTAIGMARHHMAAGEIEAKGKAISKAI 66

Query: 61  DII-----ISLRSCLSMEDGGDIAKNLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREI 115
            I+       L +  + E G ++  NL  LYD++V ++ +AN  ND Q LD+   ++  +
Sbjct: 67  GIVDNGLKAGLDAQAAGEAGAELVSNLSALYDYVVQRLFRANLHNDVQALDEADRLLENV 126

Query: 116 KSAWDQI 122
            SAW +I
Sbjct: 127 ASAWREI 133