Pairwise Alignments

Query, 136 a.a., flagellar protein FliS from Vibrio cholerae E7946 ATCC 55056

Subject, 131 a.a., flagellar chaperone, inhibits premature FliC assembly from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 3e-30
 Identities = 54/121 (44%), Positives = 84/121 (69%), Gaps = 2/121 (1%)

Query: 4   SLQAYKKVSVDSQLSAASPHKIVQMLMAGAIERLIQGKAAMQQGNIPVKGERLGKALDII 63
           +L+ Y+KV+  +Q+S A+PH++VQ+LM G+++R+ Q K A+ +G++ +KG  LGKA+DII
Sbjct: 6   ALRQYQKVNSHAQISEATPHRLVQLLMEGSLDRMAQAKGAIARGDVALKGVMLGKAIDII 65

Query: 64  ISLRSCLSME--DGGDIAKNLDQLYDFMVNQITQANHKNDPQMLDDVIEIIREIKSAWDQ 121
             LR  L  E  D  D    LD LYD+M  ++TQAN  +DP M+D+V +++  +KS WD 
Sbjct: 66  GGLREGLDKEKTDNPDELDRLDSLYDYMARRLTQANLHSDPAMIDEVAQLMITVKSGWDA 125

Query: 122 I 122
           I
Sbjct: 126 I 126