Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., sigma-54-dependent Fis family transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  400 bits (1029), Expect = e-116
 Identities = 229/493 (46%), Positives = 313/493 (63%), Gaps = 43/493 (8%)

Query: 8   LVIEDDAAIRLNLSVILEFVGEQ------CEVIESTQIDQINWSAVWGGCILGSLRGQAL 61
           LVIE D     ++   L F+G +      C  ++         +  W    +GS+   A 
Sbjct: 7   LVIESDETRVDSVLSALHFLGYRPQHGAACAAVDEA-------THAWRAVYVGSVADAAE 59

Query: 62  SEQLIQSL-TKANHIPLLVANKQPY------SLEEFPNYVGELDFPLNYPQLSDALRHCK 114
           +E+    L   A+H+P+L+A   P+      +   F   +  L+FPL Y ++++A+R+  
Sbjct: 60  AERQFALLGAAASHVPVLLAADSPWLDRFGAASSTFATRMATLEFPLRYEKMAEAMRNI- 118

Query: 115 EFLGRKGFQVLATARKNTLFRSLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVV 174
                  +  L   +   L    VG +  +  V  LI QV+  ++ VL+LGESGTGKE+V
Sbjct: 119 -------YARLLGGQSGAL--RFVGNAAPMLRVNALIRQVAPFDSTVLVLGESGTGKEMV 169

Query: 175 ARNIHYHSGRRNGPFVPINCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLF 234
           AR IH HS RR+ PFV INCGAIPAELLESELFGHEKG+FTGAI+ARKGRFE+AEGGTLF
Sbjct: 170 ARAIHAHSPRRDKPFVAINCGAIPAELLESELFGHEKGSFTGAISARKGRFEMAEGGTLF 229

Query: 235 LDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDL 294
           LDE+GDM + MQVKLLRVLQER +ERVGG+ T++ +VR++AATHRNLEE I   +FREDL
Sbjct: 230 LDEVGDMSLPMQVKLLRVLQERAYERVGGSKTLRCDVRIVAATHRNLEESIASDRFREDL 289

Query: 295 YYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAEGAQPICFTPRAINSMMEHDWPGNVR 354
           +YRL+VFP+E+P+LR+R+DD+P+L+ E   R+   G   + F+  A+ S+  H WPGNVR
Sbjct: 290 FYRLSVFPLELPSLRERLDDLPVLIAEFNQRLARRGLGVVRFSASAMQSLCAHAWPGNVR 349

Query: 355 ELANLVERMVILYPNSLVDVNHLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAED 414
           EL+NLVERM IL+P+  V  + LPTKYR               +V+E     L  +  ++
Sbjct: 350 ELSNLVERMAILFPHGEVRSSDLPTKYRGQ------------QAVDEVHGAALLALMEDE 397

Query: 415 FNFEEPQEFVPDIDAPQALPPEGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRR 474
               E     P  +  + LP +G++LK+ LAD+EV LI QAL+A GGVVA AA +L M+R
Sbjct: 398 LPPSE-AAVQPVAETLRTLPEQGLDLKDHLADIEVGLIRQALDATGGVVAHAARLLHMQR 456

Query: 475 TTLVEKMRKYNMQ 487
           TTLVEK+RKY +Q
Sbjct: 457 TTLVEKLRKYGLQ 469