Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC98

 Score =  246 bits (627), Expect = 2e-69
 Identities = 148/348 (42%), Positives = 196/348 (56%), Gaps = 48/348 (13%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           +VG+S  +Q +   I  V+ +EA VLI G+SGTGKE+VAR IH  S R   P V +NC A
Sbjct: 141 MVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAA 200

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           +   LLESELFGHEKGAFTGA   R+GRF  A+GGTLFLDEIGD+   M V+LLR +QER
Sbjct: 201 LNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMLVRLLRAIQER 260

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
             +RVG N TI  +VR+IAATHR+L   ++  +FR+DLYYRLNV  IE+P+LR   +DIP
Sbjct: 261 EVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQWREDIP 320

Query: 317 LLLQELMTRMEAEGAQPI-CFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           LL    + R      + +  FTP+A++ ++ +DWPGN+REL N VER V+L     +   
Sbjct: 321 LLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISER 380

Query: 376 HLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPP 435
            LP     + IP  Q       S++ Q                                 
Sbjct: 381 ELPLAIASTPIPLAQ-------SLDIQP-------------------------------- 401

Query: 436 EGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRK 483
                   L ++E  +I  ALE  GG    AA  LG+ R TL+ K+ +
Sbjct: 402 --------LVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR 441