Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC62

 Score =  253 bits (647), Expect = 7e-72
 Identities = 149/348 (42%), Positives = 198/348 (56%), Gaps = 48/348 (13%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           +VG+S  +Q +   I  V+ +EA VLI G+SGTGKE+VAR IH  S R   P V +NC A
Sbjct: 141 MVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAA 200

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           +   LLESELFGHEKGAFTGA   R+GRF  A+GGTLFLDEIGD+   MQV+LLR +QER
Sbjct: 201 LNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQER 260

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
             +RVG N TI  +VR+IAATHR+L   ++  +FR+DLYYRLNV  IE+P+LR R +DIP
Sbjct: 261 EVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIP 320

Query: 317 LLLQELMTRMEAEGAQPI-CFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           LL+   + R      + +  FTP+A++ ++ +DWPGN+REL N VER V+L     +   
Sbjct: 321 LLVGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISER 380

Query: 376 HLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPP 435
            LP     + IP                               + Q+  P          
Sbjct: 381 ELPLAIASTPIP-----------------------------LGQSQDIQP---------- 401

Query: 436 EGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRK 483
                   L ++E  +I  ALE  GG    AA  LG+ R TL+ K+ +
Sbjct: 402 --------LVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR 441