Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., formate hydrogenlyase transcriptional activator FlhA from Dickeya dianthicola ME23

 Score =  251 bits (641), Expect = 6e-71
 Identities = 160/394 (40%), Positives = 234/394 (59%), Gaps = 39/394 (9%)

Query: 97  LDFPLNYPQLS---DALRHCKEFLGRKGFQVLATARKNTLFRSLVGQSMGIQEVRHLIEQ 153
           LD  L Y Q++   D+L H   +L  +  + +   R    F  ++G+S+ I++V   +E 
Sbjct: 352 LDNALAYEQITRMKDSLVHENFYLTEQLTEHIHQ-RSGDEFGEIIGRSVAIRQVLEQVEM 410

Query: 154 VSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGAIPAELLESELFGHEKGA 213
           V+ +++ VLILGE+GTGKE++AR IH  S R+    V +NC AIP+ LLES+LFGHEKGA
Sbjct: 411 VAASDSTVLILGETGTGKELIARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGA 470

Query: 214 FTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKANVRV 273
           FTGA + R+GRFELA+  TLFLDE+GD+P+ +Q KLLRVLQER  ER+GG+  I  +VR+
Sbjct: 471 FTGATSQRQGRFELADNSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVIPVDVRL 530

Query: 274 IAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAEGAQP 333
           IAAT+R+L++M+  +++R DLYYRLNVFPI +P LR+R +DIPLL++    ++     + 
Sbjct: 531 IAATNRDLKQMVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRT 590

Query: 334 ICFTPR-AINSMMEHDWPGNVRELANLVERMVILYPNSLVDVNHLPTKYRYSDIPEFQPE 392
           I   P   +  +    WPGNVREL N+VER VIL   + ++++    ++  S  P   P+
Sbjct: 591 IDSIPSDMLRQLSRLPWPGNVRELENVVERAVILTRGTTLNLHMDELQHHLS--PLEVPK 648

Query: 393 PSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPDIDAPQALPPEGVNLKELLADLEVNLI 452
           PS         RD+                       P A  P    L +   + E   I
Sbjct: 649 PS--------YRDL--------------------TPPPMAAEPSSGPL-DAQEEPERERI 679

Query: 453 NQALEAQGGVVA---RAADMLGMRRTTLVEKMRK 483
            + L    G+VA    AA  LG++RTTL+ +M++
Sbjct: 680 IRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQR 713