Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  261 bits (667), Expect = 3e-74
 Identities = 155/373 (41%), Positives = 223/373 (59%), Gaps = 14/373 (3%)

Query: 4   LAKLLVIEDDAAIRLNLSVILEFVGEQCEVIEST-------QIDQINWSAVWGGCILGSL 56
           + K+L+I+D+  IR  L  ILE+  E  E+ E+        +I+  ++  V     +  +
Sbjct: 1   MPKILIIDDEKVIRSTLKEILEY--EDYEIHEAQDGVEGLKKIESQDFDLVLCDIKMPKM 58

Query: 57  RGQALSEQLIQSLTKANHIPLLVANKQPYSLEEFPNYVGELDFPLNYPQLSDALRHCKEF 116
            G  + +++ QS  +   I +        ++E      G  DF    P L+  L   +  
Sbjct: 59  DGLEVLDKVYQSDKQPQFIMISAHGSIESAVEATKK--GAFDFIPKPPDLNRLLLTVRNA 116

Query: 117 LGRKGFQVLATARKNTLFRSL--VGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVV 174
           L +K         K  L + L  VG+S  I +V+  IE+V+ T+A VLI G +GTGKE+V
Sbjct: 117 LEKKDLVTETKVLKKKLSKKLDMVGESAAILQVKETIEKVAPTDARVLITGPNGTGKELV 176

Query: 175 ARNIHYHSGRRNGPFVPINCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLF 234
           A  +H  SGR   PF+ +NC AIPAEL+ESELFGHEKGAFT A   R+G+FE A GGT+F
Sbjct: 177 AHWLHQKSGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTIF 236

Query: 235 LDEIGDMPMSMQVKLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDL 294
           LDEIGDM +S Q K+LR LQE    RVGG+  IK +VRV+AAT+++L++ I+   FREDL
Sbjct: 237 LDEIGDMSLSAQAKVLRALQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFREDL 296

Query: 295 YYRLNVFPIEMPALRDRIDDIPLLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNV 353
           Y+RL+V  I++PAL+DR +DIPLL+   +  +  E G        +AI  + E+ W GN+
Sbjct: 297 YHRLSVILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGNI 356

Query: 354 RELANLVERMVIL 366
           REL N+VER++IL
Sbjct: 357 RELRNVVERLIIL 369