Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Transcriptional regulatory protein ZraR from Alteromonas macleodii MIT1002

 Score =  254 bits (650), Expect = 3e-72
 Identities = 145/361 (40%), Positives = 206/361 (57%), Gaps = 48/361 (13%)

Query: 128 ARKNTLFRSLVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNG 187
           AR  +    +VG S  IQ+V    E+++ T+ + L+LGESGTGKEV AR+IH HS R++ 
Sbjct: 134 ARTRSGMSRIVGNSEAIQKVVRRAEKIANTDISTLLLGESGTGKEVFARSIHEHSPRKDK 193

Query: 188 PFVPINCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQV 247
           PFV INC +IP  LLESELFG+EKGAFTGA     G+ E A+GGTLFLDEIGDMP+ +Q 
Sbjct: 194 PFVAINCASIPENLLESELFGYEKGAFTGANKTTVGKIETAQGGTLFLDEIGDMPIGLQA 253

Query: 248 KLLRVLQERCFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPA 307
           K+LR LQER  ERVGG + I  ++RVI ATHR+L+ M+  + FREDLYYR+   PI +P 
Sbjct: 254 KMLRFLQERVIERVGGRNEIPVDIRVICATHRDLQAMVAQETFREDLYYRVGEMPIMIPP 313

Query: 308 LRDRIDDIPLLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVIL 366
           LR+R  DI LL +  +     E  A+   F+  A+N+M+ H WPGN+RE+ N ++  VI+
Sbjct: 314 LRERDQDIILLARTFLNIYREEFKAKAKSFSETAVNAMLAHKWPGNIREMQNKLKSAVIM 373

Query: 367 YPNSLVDVNHLPTKYRYSDIPEFQPEPSRFSSVEEQERDVLEGIFAEDFNFEEPQEFVPD 426
              +++                 QP+      V+  +                       
Sbjct: 374 AEGTVI-----------------QPDDLGLMPVDAHDE---------------------- 394

Query: 427 IDAPQALPPEGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRKYNM 486
                   PE +NL+E+    E   I +A +     +++ A++LG+ R TL   + KY+M
Sbjct: 395 --------PETLNLREVREIAESRAIRRAYQKADKNMSKTAELLGVTRPTLYSLIDKYHM 446

Query: 487 Q 487
           +
Sbjct: 447 E 447