Pairwise Alignments

Query, 488 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., DNA-binding transcriptional regulator NtrC from Acinetobacter radioresistens SK82

 Score =  246 bits (628), Expect = 1e-69
 Identities = 144/356 (40%), Positives = 204/356 (57%), Gaps = 24/356 (6%)

Query: 137 LVGQSMGIQEVRHLIEQVSTTEANVLILGESGTGKEVVARNIHYHSGRRNGPFVPINCGA 196
           ++G+S  +QEV   I +++ +   VLI GESGTGKE+VA  +H HS R+N PF+ +N  A
Sbjct: 141 IIGESPAMQEVFRAIGRLTQSHITVLINGESGTGKELVAHALHKHSPRKNKPFIALNMAA 200

Query: 197 IPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQER 256
           IP +L+E+ELFGHEKGAFTGA + R+GRFE A GGTLFLDEIGDMP   Q +LLRVL + 
Sbjct: 201 IPKDLIETELFGHEKGAFTGANSQRQGRFEQANGGTLFLDEIGDMPFETQTRLLRVLADG 260

Query: 257 CFERVGGNSTIKANVRVIAATHRNLEEMIDGQKFREDLYYRLNVFPIEMPALRDRIDDIP 316
            F RVGG+ ++K +VR++ ATH++LE+++   +FREDL++RLNV  I +P L  R +DIP
Sbjct: 261 EFYRVGGHISVKVDVRIVTATHQDLEKLVHDGRFREDLFHRLNVIRIHIPKLAHRSEDIP 320

Query: 317 LLLQELMTRMEAE-GAQPICFTPRAINSMMEHDWPGNVRELANLVERMVILYPNSLVDVN 375
           +L Q  + R   E G  P       +  M +  WPGNVR+L N    + ++     +   
Sbjct: 321 MLAQHFLARAGKELGVSPKILRQETVQYMQQLPWPGNVRQLENTCRWLTVMITGREIYPE 380

Query: 376 HLPTKYRYSDIPEFQPEPSRFSS-----VEEQERDVLEGIFAEDFNFEEPQEFVPDIDAP 430
            LP + +   IP  + E +  SS        Q+ D L G +A     +  +  + DI  P
Sbjct: 381 DLPPELK--QIPIQRAEDASISSPSIQRASSQQWDELLGQWAIQ-KLQNGEMKILDIATP 437

Query: 431 QALPPEGVNLKELLADLEVNLINQALEAQGGVVARAADMLGMRRTTLVEKMRKYNM 486
                            E  LI  AL+   G    AA++LG  R TL  K+++  M
Sbjct: 438 L---------------FERTLIQAALQQTRGRKRHAAELLGWGRNTLTRKLKELGM 478