Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 984 a.a., ATPase from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 4e-29
 Identities = 83/350 (23%), Positives = 168/350 (48%), Gaps = 28/350 (8%)

Query: 2   MSSAVQEQHSHLDSLE---DQVERY-KQVLDVMPAGV--------ILLDTQGIVREANPE 49
           + S +++ HS L  L    D + RY +Q L  +P GV        IL+  + +       
Sbjct: 609 IESRLEDYHSRLTGLAAELDALRRYHRQTLQELPMGVCSLAKDQEILMWNKAMEELTGIA 668

Query: 50  AQRLLDVPL--VGEKWYSVIQIAFAPRDDDGHEISLRNGRKVRLA----------ISAST 97
           AQR++   L  +G+ W  ++Q      D+  H+  L    + R            ++   
Sbjct: 669 AQRVVGSRLNTLGDPWKELLQGFINLPDEHLHKQHLALDGQTRWLNLHKAAIDEPLAPGN 728

Query: 98  TGQLILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP 157
           +G ++L+ DLT+T++L+ ++   +RL+S+GR+ A +AH++  P++     A NL      
Sbjct: 729 SGLVLLVEDLTDTQMLEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLREEREE 788

Query: 158 PATRERFQSKLVDRLHDLEKQVNDMLLFAKGGDNKVV-MPFSIGDLAAEFMPMVETALKN 216
                    +++++   + + V  ++ FA  G ++       + ++A + + ++    +N
Sbjct: 789 DGEITEISGQILEQTKRVSRIVQSLMSFAHAGAHQNQDEAVCLAEVAQDAIGLLALNRRN 848

Query: 217 NQIDYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISVQ 276
            ++ +    + +   + G++  LA  L NL+ NA      G  + V        + + V+
Sbjct: 849 FEVQFFNLCDPDH-WVDGDSQRLAQVLINLLSNARDATPAGGAVRVKTEAFEHTVDLIVE 907

Query: 277 DNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQMVCRAHGGRLELIS 324
           D G G+P+++  ++ EPFFTT+   +GTGLGLA+V  +   H G++ + S
Sbjct: 908 DEGSGIPQNIMDRLFEPFFTTKDPGEGTGLGLALVYSIVEEHYGQITIDS 957