Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 94.4 bits (233), Expect = 8e-24
 Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 77/381 (20%)

Query: 26  VLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVIQIAFAP------------ 73
           ++D MP+ +I LD Q  V + N EA  L    L  E     I +AF P            
Sbjct: 292 IIDSMPSALIALDEQLYVTQWNQEASALSGTRL-DEALNQPIYLAFQPLKPYLPQIRAAV 350

Query: 74  --------------RDDDGHEISLRNGRKVRLAISASTTGQLILITDLTETRLLQSRISD 119
                         +DD+    +L         +  +  G +I I D+T+   L+  +  
Sbjct: 351 EQHTVERIERVTWFKDDEAKHYALT----FYPLMGGAGRGVVIRIDDITQRLSLEEMMVQ 406

Query: 120 LQRLSSLGRMVASLAHQVRTPLSSAMLYAANLA---APNLPP-------------ATRER 163
            +++ S+G + A +AH++  PL + +    N+    +P+LP                   
Sbjct: 407 SEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNLEHAQQAGIELETVNRY 466

Query: 164 FQSKLVDRLHD--------LEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALK 215
            QS+ V +L D          K V  ML F++   N+ + P    DL A     VE A  
Sbjct: 467 LQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRS-NRQMAPC---DLPALIDQAVEIAGN 522

Query: 216 NNQIDYGQEVESEETM---------LLGNANALASALSNLVMNALQIA------GKGSQI 260
           +  +  G + + +  +         + G AN L   L NL+ NA Q         +  +I
Sbjct: 523 DFDLAIGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAIHLREDDSEPGRI 582

Query: 261 DVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQ-MVCRAHG 317
            +  R      +I V+DNG G+ E+++ +  EPFFTT+   QGTGLGL+V   ++   H 
Sbjct: 583 ILRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHK 642

Query: 318 GRLELISKEGEGACFTMCIPL 338
           G++E+ S  G+G CFT+ +PL
Sbjct: 643 GQMEVHSTLGQGTCFTLRLPL 663