Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 751 a.a., Nitrogen regulation protein NtrY (EC 2.7.3.-) from Sphingobium sp. HT1-2

 Score =  102 bits (254), Expect = 3e-26
 Identities = 90/358 (25%), Positives = 170/358 (47%), Gaps = 36/358 (10%)

Query: 3   SSAVQEQHSHLDSLEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLL----DVPL 58
           + A+   +S LD     +E    +L  + AGV+ +D  G+++  N  A  +L    D P+
Sbjct: 384 TGALVAANSQLDERRAFIEA---ILSGVSAGVLSVDRGGVIQLLNSSAAAILVREGDDPV 440

Query: 59  ---VGEKWYSVIQIAFAPRDDDGHEISLRNG-RKVRLAISASTTGQLILITDLTETRLLQ 114
              + E    + ++  +  D    ++  +   R + + +S   +G ++   D+T+     
Sbjct: 441 GRPLAEISAELAELVASQEDAGIVQVRAQGDLRTLAVKVSEDVSGHILTFDDITQ----- 495

Query: 115 SRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRE-----RFQSKLV 169
            ++SD QR ++   +   +AH+++ PL+   L A  L        T +     R    +V
Sbjct: 496 -QLSD-QRRAAWSDVARRIAHEIKNPLTPIQLAAERLQRRYGEEVTSDKSTFARLTGTIV 553

Query: 170 DRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEE 229
            ++ DL + V++   FA+     V    ++GD+A   + + E A  +  I +  E ++ E
Sbjct: 554 RQVGDLRRIVDEFSSFARM-PKPVFRREALGDIARHALFLHEVA--HPDIRFAFEADAGE 610

Query: 230 TMLLGNANALASALSNLVMNALQI---------AGKGSQIDVFFRPVNGELKISVQDNGP 280
             ++ +   L  AL+N+V NA++           G    + +     +G L I V+D+G 
Sbjct: 611 MEMVCDRRQLGQALTNIVKNAVEAIEPKPAPEDGGVRGHVRMRLHQADGALVIEVRDDGI 670

Query: 281 GVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPL 338
           G+P   + +I+EP+ TTRS+GTGLGLA+V+ +   H G +     EG GA  T+  P+
Sbjct: 671 GLPPE-RERILEPYMTTRSKGTGLGLAIVKKIVEEHMGEIRFDDAEGGGARVTLRFPV 727