Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 1e-29
 Identities = 86/351 (24%), Positives = 163/351 (46%), Gaps = 29/351 (8%)

Query: 2   MSSAVQEQHSHLDSLE---DQVERY-KQVLDVMPAGVILLDTQGIVREANPEAQRLLDVP 57
           + S +++ HS L  L    D + RY +Q L  +P GV  L     +   N   + L  + 
Sbjct: 609 IESRLEDYHSRLTGLAAELDALRRYHRQTLQELPMGVCSLAKDQEILMWNKAMEELTGIA 668

Query: 58  L----------VGEKWYSVIQIAFAPRDDDGHEISLR--------NGRKVRL--AISAST 97
                      + E W  ++Q      D+  H+  L         N  K  +   ++   
Sbjct: 669 AKHVVGSRLVTIDEPWRGLLQGFINVPDEHLHKQRLALDGQPRWLNLHKAAIDEPLAPGN 728

Query: 98  TGQLILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLP 157
           +G ++L+ DLTET+ L+ ++   +RL+S+GR+ A +AH++  P++     A NL      
Sbjct: 729 SGLVLLVEDLTETQALEDKLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLREERED 788

Query: 158 PATRERFQSKLVDRLHDLEKQVNDMLLFAKGGDN--KVVMPFSIGDLAAEFMPMVETALK 215
                   S+++D+   + + V  ++ FA  G +      P  + ++A + + ++    +
Sbjct: 789 DGEIIELSSQILDQTKRVSRIVQSLMSFAHAGGSHQNSEEPVCLAEVAQDAIGLLALNRR 848

Query: 216 NNQIDYGQEVESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPVNGELKISV 275
           N ++ +    + +     G+   LA  L NL+ NA   +  GS + V        + + V
Sbjct: 849 NFEVQFFNLCDPDH-WAEGDPQRLAQVLINLLSNARDASPPGSAVRVRSEVNEHTVDLIV 907

Query: 276 QDNGPGVPESLQHKIMEPFFTTR--SQGTGLGLAVVQMVCRAHGGRLELIS 324
           +D G G+P+++  ++ EPFFTT+   +GTGLGLA+V  +   H G++ + S
Sbjct: 908 EDEGSGIPKNIMDRLFEPFFTTKDPGEGTGLGLALVYSIVEEHYGQITIDS 958